How Rust Fungi Form Haustoria Inside Leaves
As an Amazon Associate we earn from qualifying purchases.
Rust fungi form haustoria inside leaves by growing in through the leaf’s openings, then building a feeding structure within a living cell of the leaf interior. The question of how do rust fungi form haustoria inside leaves has a clear answer in two plant pathology reviews, which describe the sequence from spore germination to a mature feeding organ. This explainer follows that sequence step by step and quotes each source directly, and it marks the points where the reviews say the process is still not understood.
Quick answer
- A haustorium is a feeding organ. The wheat rust study states that the fungus “forms haustoria to obtain nutrients from plant cells for development.”
- The structure forms inside a living host cell. The review says that “The haustorium is not directly located in the cytoplasm, although it is within the host cell.”
- Formation starts at the leaf surface and reaches the interior through stomata. The review states that “Penetration occurs through stomata by the penetration hyphae into the substomatal spaces.”
What a haustorium is
A haustorium is a specialized infection structure. The wheat rust study describes the species it examined as “an obligately parasitic filamentous fungus, can live only in the host cells where it can form a haustorium, a highly differentiated infection structure that is vital to the development and survival” of the fungus in plant tissues. That single sentence sets the stakes: the fungus cannot finish its life cycle without forming this structure inside a host cell.
The same study describes how the structure relates to the plant. It states that “haustoria penetrate only the plant cell wall and expand inside that cell to form a bridge between the pathogen and host, instead of killing the plant cell at the front of the mycelium.” The haustorium is therefore a bridge rather than a weapon that destroys the cell it enters. The review adds that the haustorium is “the key organ for biotrophic fungal pathogens,” which is the group that feeds on living tissue.
Rust fungi belong to the same broad group of biotrophs as powdery mildews. The review notes that “Although biotrophic pathogens like rusts and powdery mildews have unique life cycles, they both possess a sophisticated infection structure called the haustorium.” Different species differ in their details, but the haustorium is a shared feature of this group.
Step one: germination and reaching the stomata
The formation begins on the outside of the leaf. The review explains that “Prior to the formation of haustorium, rust fungi dikaryotic urediospores germinate on host plant epidermis and form germ tubes which sense the host cuticle topography and develop appressoria above the stomata to penetrate the intercellular spaces of the mesophyll.” In this sentence, the germ tube reads the surface of the leaf before it commits to an entry point. The appressorium is the flattened tip that presses against the surface and prepares the fungus to get inside.
The entry route is the leaf’s natural pores. The review states that “Penetration occurs through stomata by the penetration hyphae into the substomatal spaces where the fungus differentiates into substomatal vesicles.” Once inside the air space below the stomatal pore, the fungus changes shape again. It forms swollen vesicles and then grows as a thread-like hypha between the leaf’s internal cells.
The review then describes the step that leads to the haustorium itself. The intercellular hypha “comes into contact with the host mesophyll cells and develops haustorial mother cells.” A haustorial mother cell is the swelling that sits against a host cell and prepares to push a feeding structure into it. The mother cell is the starting point for the haustorium, not the haustorium itself.
Step two: building the feeding structure inside the cell
Once the mother cell touches a host cell, the host cell wall must be breached. The review states that “During haustorial formation, the host cell wall is breached and the expanding haustorium invaginates the host plasma membrane, probably by synthesizing a new membrane.” The word “probably” is part of the source’s wording, which means the membrane origin is still an open question rather than a settled fact.
The shape of the mature structure is also described. The review says that “Dikaryotic haustoria arise from external haustorial mother cells and consist of a slender tubular neck that penetrates into host cell and a haustorial body that forms distally to the neck.” The neck is the narrow passage through the host wall, and the body is the swollen end that sits inside the cell. This two-part form explains why the structure looks like a bulb on a thin stalk in microscope images.
The review also records a transfer step. It states that “During haustorial formation in dikaryotic rusts, migration of haustorial mother cell cytoplasmic contents, including the two haploid nuclei, into the haustorium occurs through the neck structure leaving the haustorial mother cell highly vacuolated and enucleated.” In other words, the contents of the mother cell pass through the neck, leaving the mother cell itself mostly empty.
Step three: the membrane and the matrix around the haustorium
The haustorium is not simply placed in the host cell’s cytoplasm. The review explains that “The haustorium is not directly located in the cytoplasm, although it is within the host cell, instead, it is surrounded by an extrahaustorial membrane (EHM), usually a differentiated extension of the host plant cell cytoplasm.” This membrane is one of the main features that makes the haustorium a boundary between the fungus and the host.
Between the fungal wall and that membrane sits a gel-like layer. The review states that “an extrahaustorial matrix (EHMA), a gel-like layer enriched in carbohydrates, develops between the haustoria cell wall and the cell plasma membrane.” The matrix has two roles, which the review gives as “first to acquire nutrients like sugar and amino acids into fungal cells, and second to secrete effectors into the host cell to suppress immunity and manipulate the host.”
That second role links the structure to disease. Effectors are proteins that the fungus delivers into the host to change how the host responds. The review summarizes the function by saying that “The haustorium is not only essential in the uptake of nutrients without killing the host, but also in the secretion and delivery of effectors into the host cells.” So the same structure both feeds the fungus and alters the host.
How we chose
The two sources were selected because each one addresses the mechanism in the question directly. Both pages loaded with HTTP 200 on the check date recorded in the sources list, and both were read in full text before any sentence was written.
What we could not verify
What the sources do not say
The review states that “The major unanswered questions about haustorial biology include its establishment and composition, how it evades host recognition, how it acquires nutrients from the host cells, and how secreted effectors suppress host defense responses.” Those questions cover the core of the process, so the sources do not give a complete molecular account of how the structure is built. Neither source describes a home garden test, and neither gives a control method for a gardener. Claims about treating a rust infection on a garden plant would need a separate extension source.
Frequently asked questions
What is a haustorium in a rust fungus?
It is a feeding and infection structure. The wheat rust study states that the fungus “forms haustoria to obtain nutrients from plant cells for development,” and that these structures are essential for its survival.
Do rust fungi enter leaves through stomata?
The review says that “Penetration occurs through stomata by the penetration hyphae into the substomatal spaces,” which means the stomatal pore is the entry route described.
Does a haustorium kill the leaf cell it enters?
The wheat rust study says the haustoria “penetrate only the plant cell wall and expand inside that cell to form a bridge between the pathogen and host, instead of killing the plant cell at the front of the mycelium.”
What surrounds a haustorium inside the host cell?
A membrane and a matrix. The review describes “an extrahaustorial membrane (EHM)” and “an extrahaustorial matrix (EHMA), a gel-like layer enriched in carbohydrates.”
Is it known how the haustorium gets its membrane?
Not fully. The review says the expanding haustorium invaginates the host membrane “probably by synthesizing a new membrane,” and it lists the origin of the structure among the unanswered questions.
For related pathogen feeding, see how wheat rust gets through leaf stomata, and for the powdery mildew version of the same feeding problem, read how powdery mildew fungi feed from plant cells.
Sources
- [1] Haustoria – arsenals during the interaction between wheat and Puccinia striiformis f. sp. tritici, PMC. https://pmc.ncbi.nlm.nih.gov/articles/PMC6913192/ (checked 2026-10-28, HTTP 200)
- [2] The haustorium: The root of biotrophic fungal pathogens, Frontiers in Plant Science, 2022. https://www.frontiersin.org/journals/plant-science/articles/10.3389/fpls.2022.963705/full (checked 2026-10-28, HTTP 200)



